Search results for "Flavobacterium columnare"

showing 10 items of 65 documents

Environment may be the source of Flavobacterium columnare outbreaks at fish farms

2012

Summary Flavobacterium columnare, causing columnaris disease, was isolated for the first time from free water and biofilms in the environment outside fish farms. Fourteen isolates were found from Central Finland from a river by a water intake of a salmonid farm and 400 m upstream of the farm. One isolate was from a lake not under the influence of any fish farming. The bacterium could not be isolated from five other lakes in Central Finland or from three lakes in Eastern Finland, none of them in use for fish farming. Among the environmental isolates there was both genetic variability and difference in virulence, but the isolates were less virulent than the isolates originating from a disease…

Veterinary medicinebiologyHost (biology)Ecologybusiness.industryanimal diseasesFish farmingVirulenceOutbreakmedicine.diseasebiology.organism_classificationAgricultural and Biological Sciences (miscellaneous)ColumnarisAgricultureFlavobacterium columnaremedicineGenetic variabilitybusinessEcology Evolution Behavior and SystematicsEnvironmental Microbiology Reports
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Bacteriophage Adherence to Mucus Mediates Preventive Protection against Pathogenic Bacteria

2019

The mucosal surfaces of animals are habitat for microbes, including viruses. Bacteriophages—viruses that infect bacteria—were shown to be able to bind to mucus. This may result in a symbiotic relationship in which phages find bacterial hosts to infect, protecting the mucus-producing animal from bacterial infections in the process. Here, we studied phage binding on mucus and the effect of mucin on phage-bacterium interactions. The significance of our research is in showing that phage adhesion to mucus results in preventive protection against bacterial infections, which will serve as basis for the development of prophylactic phage therapy approaches. Besides, we also reveal that exposure to m…

medicine.medical_treatmentvirusesbacteriophage therapymedicine.disease_causebakteeritBacteriophageFish Diseaseshost-pathogen interactionslimakalvotPathogenOrganism1183 Plant biology microbiology virology11832 Microbiology and virology2. Zero hunger0303 health scienceshostpathogen interactionsbiologyvirulenssimucosal pathogensQR1-5023. Good healthBACTERIOPHAGEResearch ArticleProtein BindingbacteriophagesPhage therapyeducationvirusFlavobacteriumMicrobiologybakteriofagitHost-Microbe BiologyMicrobiologyViral Proteins03 medical and health sciencesImmunityVirologyAntibiosismedicineAnimalsPhage Therapy030304 developmental biologyMucous MembraneBacteria030306 microbiologybacterial virulenceMucinPathogenic bacteriaEditor's Pickkalatauditbiology.organism_classificationMucusfagiterapiaMucusFlavobacterium columnareBacteriamBio
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Influence of rearing conditions on Flavobacterium columnare infection of rainbow trout, Oncorhynchus mykiss (Walbaum).

2005

The influence of rearing conditions on Flavobacterium columnare infection of rainbow trout, Oncorhynchus mykiss (Walbaum), was studied experimentally in the laboratory and at a fish farm. In experiment I, the effect of parasitic infection on columnaris disease was studied using F. columnare carrier fish. The fish were exposed to Diplostomum spathaceum cercariae and a set of other stressors in order to induce clinical columnaris infection. Parasitic infection and other stressors failed to induce the disease. Disease occurred when the fish were challenged with F. columnare, but D. spathaceum infection did not enhance the severity of the infection. In experiment II, the influence of rearing de…

Veterinary medicineVeterinary (miscellaneous)Fish farmingAquacultureTrematode InfectionsAquatic SciencePopulation densityParasitic infectionFlavobacteriumPolymerase Chain ReactionColumnarisFish DiseasesDisease management (agriculture)Flavobacteriaceae InfectionsmedicineDisease Transmission InfectiousAnimalsFinlandPopulation DensityAnalysis of VariancebiologyEcologyTemperaturebiology.organism_classificationmedicine.diseaseDiplostomum spathaceumOncorhynchus mykissFlavobacterium columnareRainbow troutJournal of fish diseases
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Association of colony morphotypes with virulence, growth and resistance against protozoan predation in the fish pathogen Flavobacterium columnare.

2014

Many opportunistic pathogens can alternate between inside- and outside-host environments during their life cycle. The opportunistic fish pathogen Flavobacterium columnare is an inhabitant of the natural microbial community and causes significant yearly losses in aquaculture worldwide. The bacterium grows in varying colony morphotypes that are associated with either virulence (rhizoid type) or resistance to starvation and phages (rough type). Rough type strains can arise spontaneously or can be induced by phage infection. To identify the determinants of morphotype fitness, we measured virulence, growth parameters, biofilm-forming ability and resistance to amoeba and ciliate predation of both…

PopulationVirulenceApplied Microbiology and BiotechnologyMicrobiologyFlavobacteriumMicrobiologyTetrahymena thermophila03 medical and health sciencesFish DiseasesAnimalsBacteriophages14. Life underwatereducationPathogenZebrafish030304 developmental biologyCiliate0303 health scienceseducation.field_of_studyAcanthamoeba castellaniiEcologybiologyVirulence030306 microbiologyfungiBiofilmbiology.organism_classificationRhizoidFlavobacterium columnareFlavobacteriumFEMS microbiology ecology
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Immunostimulants in prevention of columnaris disease of rainbow trout, Oncorhynchus mykiss (Walbaum).

2009

Veterinary (miscellaneous)Columnaris diseaseAquatic ScienceBiologybiology.organism_classificationFlavobacteriumSurvival AnalysisMicrobiologyFisheryFish DiseasesAdjuvants ImmunologicFlavobacteriaceae InfectionsOncorhynchus mykissFlavobacterium columnareAnimalsRainbow troutFlavobacteriumFinlandJournal of fish diseases
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Freezing Induces Biased Results in the Molecular Detection of Flavobacterium columnare

2006

ABSTRACT Specific PCR detection and electron microscopy of Flavobacterium columnare revealed the risk of false-negative results in molecular detection of this fish pathogen. Freezing and thawing destroyed the cells so that DNA was for the most part undetectable by PCR. The detection of bacteria was also weakened after prolonged enrichment cultivation of samples from infected fish.

DNA BacterialApplied Microbiology and BiotechnologyFlavobacteriumPolymerase Chain ReactionBacterial geneticsMicrobiologylaw.inventionchemistry.chemical_compoundlawFreezingMethodsPathogenFalse Negative ReactionsPolymerase chain reactionEcologybiologybiology.organism_classificationFlavobacteriaceaeMicroscopy ElectronchemistryFlavobacterium columnareBacteriaDNAFlavobacteriumFood ScienceBiotechnology
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Phage Specificity of the Freshwater Fish Pathogen Flavobacterium columnare

2011

ABSTRACT Flavobacteria and their phages were isolated from Finnish freshwaters and fish farms. Emphasis was placed on finding phages infecting the fish pathogen Flavobacterium columnare for use as phage therapy agents. The host ranges of the flavobacterial phages varied, phages infecting F. columnare being more host specific than the other phages.

Phage therapyvirusesmedicine.medical_treatmentFish farmingMolecular Sequence DataFresh WaterFlavobacteriumApplied Microbiology and BiotechnologyHost SpecificityMicrobiologyFish DiseasesFlavobacteriaceae InfectionsEnvironmental MicrobiologymedicineAnimalsBacteriophagesPathogenFinlandEcologybiologyHost (biology)FishesSequence Analysis DNAbiology.organism_classificationVirologyDNA ViralFlavobacterium columnareFreshwater fishFlavobacteriumBacteriaFood ScienceBiotechnologyApplied and Environmental Microbiology
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Prophages and Past Prophage-Host Interactions Revealed by CRISPR Spacer Content in a Fish Pathogen

2020

The role of prophages in the evolution, diversification, or virulence of the fish pathogen Flavobacterium columnare has not been studied thus far. Here, we describe a functional spontaneously inducing prophage fF4 from the F. columnare type strain ATCC 23463, which is not detectable with commonly used prophage search methods. We show that this prophage type has a global distribution and is present in strains isolated from Finland, Thailand, Japan, and North America. The virions of fF4 are myoviruses with contractile tails and infect only bacterial strains originating from Northern Finland. The fF4 resembles transposable phages by similar genome organization and several gene orthologs. Addit…

Microbiology (medical)prophageVirulencevirusMicrobiologyGenomebakteriofagitArticlebakteeritFlavobacterium columnare03 medical and health sciencesLysogenVirologyCRISPRlcsh:QH301-705.5genomeProphage030304 developmental biology11832 Microbiology and virologyGenetics0303 health sciencesbiology030306 microbiologyBacteroidetesbacteroidetesGenomovarkalatauditbiology.organism_classification<i>Flavobacterium columnare</i>lcsh:Biology (General)CRISPRperimäFlavobacterium columnareCRISPR LociBACTERIOPHAGEMicroorganisms
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The use of phage FCL-2 as an alternative to chemotherapy against columnaris disease in aquaculture

2015

Flavobacterium columnare, the causative agent of columnaris disease in fish, causes millions of dollars of losses in the US channel catfish industry alone, not to mention aquaculture industry worldwide. Novel methods are needed for the control and treatment of bacterial diseases in aquaculture to replace traditionally used chemotherapies. A potential solution could be the use of phages, i.e., bacterial viruses, host-specific and self-enriching particles that can be can easily distributed via water flow. We examined the efficacy of phages to combat columnaris disease. A previously isolated phage, FCL-2, infecting F. columnare, was characterized by sequencing. The 47 142 bp genome of the phag…

Microbiology (medical)phage therapyanimal structuresPhage therapyWater flowvirusesFish farmingmedicine.medical_treatmentPopulationlcsh:QR1-502BiologyMicrobiologylcsh:MicrobiologyMicrobiologyFlavobacterium columnareAquaculturemedicine14. Life underwatereducation1183 Plant biology microbiology virologyOriginal Researchfishdiseaseeducation.field_of_studybiologybusiness.industryta1183biology.organism_classification6. Clean wateraquacultureFlavobacterium columnareRainbow troutBacterial virusbusinessphagetherapyFrontiers in Microbiology
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High Nutrient Concentration Can Induce Virulence Factor Expression and Cause Higher Virulence in an Environmentally Transmitted Pathogen

2016

Environmentally transmitted opportunistic pathogens shuttle between two substantially different environments: outside-host and within-host habitats. These environments differ from each other especially with respect to nutrient availability. Consequently, the pathogens are required to regulate their behavior in response to environmental cues in order to survive, but how nutrients control the virulence in opportunistic pathogens is still poorly understood. In this study, we examined how nutrient level in the outside-host environment affects the gene expression of putative virulence factors of the opportunistic fish pathogen Flavobacterium columnare. The impact of environmental nutrient concen…

0301 basic medicineVirulence Factors030106 microbiologyvirulence factorsSoil ScienceVirulenceBiologyReal-Time Polymerase Chain ReactionFlavobacteriumVirulence factorflavobacterium columnareMicrobiologyFish Diseases03 medical and health sciencesMicrobial ecologynutrientscolony typeAnimalsCollagenasesPathogenGeneEcology Evolution Behavior and SystematicsChondroitin LyasesEcologyHost (biology)RT-qPCREnvironmental Exposurechondroitinasebiology.organism_classificationcollagenase030104 developmental biologyFoodOncorhynchus mykissFlavobacterium columnareWater MicrobiologyBacteriaMicrobial Ecology
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